| 5 | Stefan Effenberg | Second Group Stage | UEFA Champions League 00/01 |
| 5 | Hasan Salihamidzic | First Group Stage | UEFA Champions League 00/01 |
| 4 | Benjamin Pavard | Round of 16 | UEFA Champions League 22/23 |
| 4 | Xabi Alonso | Group Stage | UEFA Champions League 14/15 |
| 4 | Dante | Group Stage | UEFA Champions League 13/14 |
| 4 | Javi Martinez | Group Stage | UEFA Champions League 12/13 |
| 4 | Bastian Schweinsteiger | Group Stage | UEFA Champions League 12/13 |
| 4 | Bastian Schweinsteiger | Group Stage | UEFA Champions League 11/12 |
| 4 | Holger Badstuber | Group Stage | UEFA Champions League 11/12 |
| 4 | Mark van Bommel | Round of 16 | UEFA Champions League 09/10 |
| 4 | Stefan Effenberg | Final | UEFA Champions League 98/99 |
| 4 | Mark van Bommel | Group Stage | UEFA Champions League 06/07 |
| 4 | Willy Sagnol | Group Stage | UEFA Champions League 05/06 |
| 4 | Mehmet Scholl | Semi-finals | UEFA Champions League 99/00 |
| 4 | Bixente Lizarazu | First Group Stage | UEFA Champions League 00/01 |
| 4 | Jens Jeremies | Second Group Stage | UEFA Champions League 00/01 |
| 3 | Marcel Sabitzer | Group Stage | UEFA Champions League 22/23 |
| 3 | Joshua Kimmich | Group Stage | UEFA Champions League 22/23 |
| 3 | Dayot Upamecano | Group Stage | UEFA Champions League 21/22 |
| 3 | Joshua Kimmich | Group Stage | UEFA Champions League 19/20 |
| 3 | Joshua Kimmich | Group Stage | UEFA Champions League 18/19 |
| 3 | Franck Ribery | Group Stage | UEFA Champions League 17/18 |
| 3 | Arturo Vidal | Group Stage | UEFA Champions League 16/17 |
| 3 | Philipp Lahm | Group Stage | UEFA Champions League 16/17 |
| 3 | Arturo Vidal | Round of 16 | UEFA Champions League 15/16 |
| 3 | Alphonso Davies | Group Section | UEFA Champions League 23/24 |
| 3 | Juan Bernat | Group Stage | UEFA Champions League 14/15 |
| 3 | Javi Martinez | Group Stage | UEFA Champions League 13/14 |
| 3 | Dante | Group Stage | UEFA Champions League 12/13 |
| 3 | Mario Mandzukic | Group Stage | UEFA Champions League 12/13 |
| 3 | David Alaba | Quarter-finals | UEFA Champions League 11/12 |
| 3 | Luiz Gustavo | Group Stage | UEFA Champions League 11/12 |
| 3 | Bastian Schweinsteiger | Group Stage | UEFA Champions League 10/11 |
| 3 | Danijel Pranjic | Group Stage | UEFA Champions League 09/10 |
| 3 | Bastian Schweinsteiger | Group Stage | UEFA Champions League 09/10 |
| 3 | Holger Badstuber | Group Stage | UEFA Champions League 09/10 |
| 3 | Martin Demichelis | Group Stage | UEFA Champions League 08/09 |
| 3 | Tim Borowski | Group Stage | UEFA Champions League 08/09 |
| 3 | Lothar Matthaus | Semi-finals | UEFA Champions League 98/99 |
| 3 | Bixente Lizarazu | Quarter-finals | UEFA Champions League 98/99 |
| 3 | Robert Kovac | Group Stage | UEFA Champions League 04/05 |
| 3 | Martin Demichelis | Group Stage | UEFA Champions League 04/05 |
| 3 | Bixente Lizarazu | Group Stage | UEFA Champions League 03/04 |
| 3 | Jens Jeremies | Semi-finals | UEFA Champions League 99/00 |
| 3 | Nico Kovac | First Group Stage | UEFA Champions League 01/02 |
| 3 | Thomas Linke | Second Group Stage | UEFA Champions League 00/01 |
| 2 | Dayot Upamecano | Group Stage | UEFA Champions League 22/23 |
| 2 | Josip Stanisic | Group Stage | UEFA Champions League 22/23 |
| 2 | Noussair Mazraoui | Group Stage | UEFA Champions League 22/23 |
| 2 | Lucas Hernandez | Group Stage | UEFA Champions League 21/22 |
| 2 | David Alaba | Group Stage | UEFA Champions League 20/21 |
| 2 | Jerome Boateng | Group Stage | UEFA Champions League 20/21 |
| 2 | Thomas Muller | Group Stage | UEFA Champions League 20/21 |
| 2 | Lucas Hernandez | Group Stage | UEFA Champions League 20/21 |
| 2 | Joshua Kimmich | Round of 16 | UEFA Champions League 20/21 |
| 2 | Serge Gnabry | Group Stage | UEFA Champions League 19/20 |
| 2 | Thiago Alcantara | Group Stage | UEFA Champions League 19/20 |
| 2 | Alphonso Davies | Quarter-finals | UEFA Champions League 19/20 |
| 2 | Corentin Tolisso | Group Stage | UEFA Champions League 17/18 |
| 2 | Sebastian Rudy | Group Stage | UEFA Champions League 17/18 |
